Structuring and analytics of EMG data from MYO armbands. Work by IAESTE intern Markus Hoff Skudal, summer 2021.
__pycache__ | ||
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.vscode | ||
python_speech_features.egg-info | ||
.DS_Store | ||
.gitignore | ||
Handle_emg_data.py | ||
mfcc_data.json | ||
Neural_Network_Analysis.py | ||
Present_data.py | ||
README.md | ||
Signal_prep.py | ||
Test_functions.py |
Analysis of Keystroke EMG data for identification
EMG data handling and Neural Network analysis
Scripts to handle CSV files composed by 2 * 8 EMG sensors(left & right) devided into sessions per subject. The raw data is organised in a CSV_handler object with Handle_emg_data.py. Processing of data can take the further form of:
- Preprocessing with Signal_prep.py - FFT, MFCC, Wavelet db4
- Storage for Neural Network analysis with NN_handler(Handle_emg_data.py) - combined EMG DataFrame, combined MFCCs DataFrame
- Neural Network analysis in Neural_Network_Analysis.py - LSTM NN, etc.
Technologies used
- Common libs: Numpy, Pandas, Pathlib, Sklearn, Scipy, Matplotlib, Tensorflow, Keras
- Community libs: Python_speech_features, Pywt
Challanges in the module
- The CSV handlig is for the moment hard-coded to fit the current project due to a very specific file structure and respective naming convention.
- Preprocessing is still limited in Signal_prep.py
- Neural_Network_Analysis.py lacks a more general way to access multiple types of networks
Credits for insporational code
- Kapre - Keunwoochoi
- Audio-Classification: seth814
- DeepLearningForAudioWithPyhton - musikalkemist
Table of Contents
File and classes | Description and help functions |
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Handle_emg_data.py: - Data_container - CSV_handler - NN_handler | Handles, manipulates, and stores data for analysis. - Data_container is a class that describes the data for each subject in the experiment. Use init. - CSV_handler takes data from CSV files and places it in Data_container for each subject. Use load_data() to load csv data into data containers and add the containers to the CSV_handler's 'data_container_dict', indexed by subject number. Use get_data() to retrieve specific data. - NN_handler prepares data for further analysis in Neural Networks. This class has storage for this data and/or can save it to a json file. |
Signal_prep.py | |
Present_data.py | |
Neural_Network_Analysis.py |