BP2024/annotation_app/app.py

from flask import Flask, render_template, request, redirect, flash, session, url_for
from models import db, Users, Annotations, Samples
from dotenv import load_dotenv
from sqlalchemy.orm import aliased
import sqlalchemy
import os


import logging

load_dotenv()

app = Flask(__name__)

app.config['SQLALCHEMY_DATABASE_URI'] = os.getenv('DB_URI')
app.secret_key = os.getenv('SECRET_KEY')

db.init_app(app)



@app.route('/', methods=['GET'])
def home():
    session.pop('id_user', None)
    return render_template('home.html')

@app.route('/login', methods=['POST'])
def login():
    if request.method == 'POST':
        email = request.form['email']
        if '@' in email:
            try:
                splitted = email.split('@')
                name, surname = splitted[0].split('.')[:2]
                domain = splitted[1]
                if 'tuke' not in domain:
                    raise ValueError
            except ValueError:
                flash('Nie je validný TUKE email')
                return redirect('/')
            try:
                db.session.add(Users(name, surname, email))
                db.session.commit()
            except sqlalchemy.exc.IntegrityError as err:
                db.session.rollback()
                logging.info('Logged existing email')
            user = Users.query.filter_by(email=email).first()
            session['email'] = email
            session['id_user'] = user._id
            return redirect('/anot')
        flash('Nie je validný TUKE email')
        return redirect('/')

@app.route('/anot', methods=['GET'])
def anot():
    if 'id_user' in session:
        try:
            annotated_count = Annotations.query.filter_by(user_id=session['id_user']).count()
            
            # query = text(
            #     f'''
            #     SELECT samples._id, text 
            #     FROM samples
            #     LEFT JOIN annotations
            #     ON samples._id = annotations.sample_id
            #     WHERE samples._id NOT IN (
            #         SELECT sample_id
            #         FROM annotations
            #         GROUP BY sample_id
            #         HAVING COUNT(sample_id) > 5
            #     )
            #     AND samples._id NOT IN (
            #         SELECT samples._id
            #         FROM samples
            #         LEFT JOIN annotations
            #         ON samples._id = annotations.sample_id
            #         WHERE annotations.user_id IS {session['id_user']}
            #     )
            #     ORDER BY samples._id ASC
            #     LIMIT 1;
            #     '''
            # )

            annotations_alias = aliased(Annotations)

            # Construct the query
            query = (
                db.session.query(Samples._id, Samples.text)
                .outerjoin(annotations_alias, Samples._id == annotations_alias.sample_id)
                .filter(
                    ~Samples._id.in_(
                        db.session.query(Annotations.sample_id)
                        .group_by(Annotations.sample_id)
                        .having(db.func.count(Annotations.sample_id) > 5)
                    ),
                    ~Samples._id.in_(
                        db.session.query(Samples._id)
                        .outerjoin(Annotations, Samples._id == Annotations.sample_id)
                        .filter(Annotations.user_id == session['id_user'])
                    )
                )
                .order_by(Samples._id.asc())
                .limit(1)
            )
            sample_id, sample_text = query.one_or_none()

            data = {
                'email': session.get('email'),
                'text': sample_text,
                'sample_id': sample_id,
                'annotated_count': annotated_count
            }

        except (sqlalchemy.exc.OperationalError) as err:
            print(err)
            logging.info('Annotationss started')
            data = {
                'email': session.get('email'),
                'text': Samples.query.order_by(Samples._id.asc()).first().text,
                'sample_id': Samples.query.order_by(Samples._id.asc()).first()._id,
                'annotated_count': annotated_count
            }
        return render_template('anot.html', **data)
    return redirect('/')

@app.route('/process_anot', methods=['POST'])
def process():
    if request.method == 'POST':
        data = request.get_json()
        print(data)
        db.session.add(Annotations(
            user_id=session['id_user'],
            sample_id=data['sample_id'],
            label=data['value']
        ))
        db.session.commit()
        return redirect(url_for('anot'))

if __name__ == "__main__":
    app.run(host="0.0.0.0", port=5050)