Compare commits
No commits in common. "5b4fb77ec8ec1a22ec0143c1b6e716bc7356ca72" and "59dd1b81383a3699de2482946f1a645093e5f325" have entirely different histories.
5b4fb77ec8
...
59dd1b8138
160
.gitignore
vendored
160
.gitignore
vendored
@ -1,164 +1,4 @@
|
|||||||
# CUSTOM
|
|
||||||
data
|
data
|
||||||
docs
|
docs
|
||||||
logs
|
logs
|
||||||
psf_lib
|
psf_lib
|
||||||
|
|
||||||
Created by https://www.toptal.com/developers/gitignore/api/python,visualstudiocode
|
|
||||||
# Edit at https://www.toptal.com/developers/gitignore?templates=python,visualstudiocode
|
|
||||||
|
|
||||||
### Python ###
|
|
||||||
# Byte-compiled / optimized / DLL files
|
|
||||||
__pycache__/
|
|
||||||
*.py[cod]
|
|
||||||
*$py.class
|
|
||||||
|
|
||||||
# C extensions
|
|
||||||
*.so
|
|
||||||
|
|
||||||
# Distribution / packaging
|
|
||||||
.Python
|
|
||||||
build/
|
|
||||||
develop-eggs/
|
|
||||||
dist/
|
|
||||||
downloads/
|
|
||||||
eggs/
|
|
||||||
.eggs/
|
|
||||||
lib/
|
|
||||||
lib64/
|
|
||||||
parts/
|
|
||||||
sdist/
|
|
||||||
var/
|
|
||||||
wheels/
|
|
||||||
share/python-wheels/
|
|
||||||
*.egg-info/
|
|
||||||
.installed.cfg
|
|
||||||
*.egg
|
|
||||||
MANIFEST
|
|
||||||
|
|
||||||
# PyInstaller
|
|
||||||
# Usually these files are written by a python script from a template
|
|
||||||
# before PyInstaller builds the exe, so as to inject date/other infos into it.
|
|
||||||
*.manifest
|
|
||||||
*.spec
|
|
||||||
|
|
||||||
# Installer logs
|
|
||||||
pip-log.txt
|
|
||||||
pip-delete-this-directory.txt
|
|
||||||
|
|
||||||
# Unit test / coverage reports
|
|
||||||
htmlcov/
|
|
||||||
.tox/
|
|
||||||
.nox/
|
|
||||||
.coverage
|
|
||||||
.coverage.*
|
|
||||||
.cache
|
|
||||||
nosetests.xml
|
|
||||||
coverage.xml
|
|
||||||
*.cover
|
|
||||||
*.py,cover
|
|
||||||
.hypothesis/
|
|
||||||
.pytest_cache/
|
|
||||||
cover/
|
|
||||||
|
|
||||||
# Translations
|
|
||||||
*.mo
|
|
||||||
*.pot
|
|
||||||
|
|
||||||
# Django stuff:
|
|
||||||
*.log
|
|
||||||
local_settings.py
|
|
||||||
db.sqlite3
|
|
||||||
db.sqlite3-journal
|
|
||||||
|
|
||||||
# Flask stuff:
|
|
||||||
instance/
|
|
||||||
.webassets-cache
|
|
||||||
|
|
||||||
# Scrapy stuff:
|
|
||||||
.scrapy
|
|
||||||
|
|
||||||
# Sphinx documentation
|
|
||||||
docs/_build/
|
|
||||||
|
|
||||||
# PyBuilder
|
|
||||||
.pybuilder/
|
|
||||||
target/
|
|
||||||
|
|
||||||
# Jupyter Notebook
|
|
||||||
.ipynb_checkpoints
|
|
||||||
|
|
||||||
# IPython
|
|
||||||
profile_default/
|
|
||||||
ipython_config.py
|
|
||||||
|
|
||||||
# pyenv
|
|
||||||
# For a library or package, you might want to ignore these files since the code is
|
|
||||||
# intended to run in multiple environments; otherwise, check them in:
|
|
||||||
# .python-version
|
|
||||||
|
|
||||||
# pipenv
|
|
||||||
# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
|
|
||||||
# However, in case of collaboration, if having platform-specific dependencies or dependencies
|
|
||||||
# having no cross-platform support, pipenv may install dependencies that don't work, or not
|
|
||||||
# install all needed dependencies.
|
|
||||||
#Pipfile.lock
|
|
||||||
|
|
||||||
# PEP 582; used by e.g. github.com/David-OConnor/pyflow
|
|
||||||
__pypackages__/
|
|
||||||
|
|
||||||
# Celery stuff
|
|
||||||
celerybeat-schedule
|
|
||||||
celerybeat.pid
|
|
||||||
|
|
||||||
# SageMath parsed files
|
|
||||||
*.sage.py
|
|
||||||
|
|
||||||
# Environments
|
|
||||||
.env
|
|
||||||
.venv
|
|
||||||
env/
|
|
||||||
venv/
|
|
||||||
ENV/
|
|
||||||
env.bak/
|
|
||||||
venv.bak/
|
|
||||||
|
|
||||||
# Spyder project settings
|
|
||||||
.spyderproject
|
|
||||||
.spyproject
|
|
||||||
|
|
||||||
# Rope project settings
|
|
||||||
.ropeproject
|
|
||||||
|
|
||||||
# mkdocs documentation
|
|
||||||
/site
|
|
||||||
|
|
||||||
# mypy
|
|
||||||
.mypy_cache/
|
|
||||||
.dmypy.json
|
|
||||||
dmypy.json
|
|
||||||
|
|
||||||
# Pyre type checker
|
|
||||||
.pyre/
|
|
||||||
|
|
||||||
# pytype static type analyzer
|
|
||||||
.pytype/
|
|
||||||
|
|
||||||
# Cython debug symbols
|
|
||||||
cython_debug/
|
|
||||||
|
|
||||||
### VisualStudioCode ###
|
|
||||||
.vscode/*
|
|
||||||
!.vscode/settings.json
|
|
||||||
!.vscode/tasks.json
|
|
||||||
!.vscode/launch.json
|
|
||||||
!.vscode/extensions.json
|
|
||||||
*.code-workspace
|
|
||||||
|
|
||||||
# Local History for Visual Studio Code
|
|
||||||
.history/
|
|
||||||
|
|
||||||
### VisualStudioCode Patch ###
|
|
||||||
# Ignore all local history of files
|
|
||||||
.history
|
|
||||||
.ionide
|
|
@ -1,7 +1,6 @@
|
|||||||
import json
|
import json
|
||||||
|
|
||||||
from keras import callbacks
|
from keras import callbacks
|
||||||
from pandas.core.frame import DataFrame
|
|
||||||
from psf_lib.python_speech_features.python_speech_features.base import mfcc
|
from psf_lib.python_speech_features.python_speech_features.base import mfcc
|
||||||
import numpy as np
|
import numpy as np
|
||||||
from sklearn.model_selection import train_test_split
|
from sklearn.model_selection import train_test_split
|
||||||
@ -140,7 +139,7 @@ def prepare_datasets_sessions(X, y, session_lengths, test_session_index=4, nr_su
|
|||||||
return X_train, X_test, y_train, y_test
|
return X_train, X_test, y_train, y_test
|
||||||
|
|
||||||
# NOT FUNCTIONAL
|
# NOT FUNCTIONAL
|
||||||
def prepare_datasets_new(test_session_indexes, X, y, session_lengths, nr_subjects=5, nr_sessions=4):
|
def prepare_datasets_new(test_session_indexes:list, X, y, session_lengths, nr_subjects=5, nr_sessions=4):
|
||||||
|
|
||||||
X_list = []
|
X_list = []
|
||||||
y_list = []
|
y_list = []
|
||||||
@ -938,43 +937,6 @@ def plot_comp_val_SoftHard(X_soft, y_soft, X_hard, y_hard, session_lengths_soft,
|
|||||||
plt.style.use('seaborn-dark-palette')
|
plt.style.use('seaborn-dark-palette')
|
||||||
plt.show()
|
plt.show()
|
||||||
|
|
||||||
# Plots training and validation history for CNN_1D network with SOFT and HARD data from CSV file
|
|
||||||
# Input: None -> CSV from path
|
|
||||||
# Output: None -> plot & CSV log
|
|
||||||
def plot_N_S_val_comp():
|
|
||||||
|
|
||||||
df_3 = pd.read_csv('/Users/Markus/Prosjekter git/Slovakia 2021/logs/Soft_hard_comparison_3/soft_hard_comparison_acc_data.csv')[['soft_val_acc', 'hard_val_acc']]
|
|
||||||
df_1 = pd.read_csv('/Users/Markus/Prosjekter git/Slovakia 2021/logs/Soft_hard_comparison_single/soft_hard_comparison_acc_data.csv')[['soft_val_acc', 'hard_val_acc']]
|
|
||||||
|
|
||||||
df_3 = df_3.rename(columns={'soft_val_acc': 'natural_val_3', 'hard_val_acc': 'strong_val_3'})
|
|
||||||
df_1 = df_1.rename(columns={'soft_val_acc': 'natural_val_1', 'hard_val_acc': 'strong_val_1'})
|
|
||||||
comp_df = pd.concat([df_3, df_1], axis=1)
|
|
||||||
comp_df.to_csv('logs/Natural_Strong_comp_comb/N_S_val_comp.csv')
|
|
||||||
|
|
||||||
# Plot new N/S val comp:
|
|
||||||
fig, axs = plt.subplots(nrows=1, ncols=2, sharey=True, sharex=True, figsize=(13, 4))
|
|
||||||
plt.ylim(0, 1)
|
|
||||||
plt.subplots_adjust(hspace=1.0, top=0.85, bottom=0.15, right=0.75)
|
|
||||||
fig.text(0.435, 0.03, 'Epochs', ha='center')
|
|
||||||
fig.text(0.07, 0.5, 'Accuracy', va='center', rotation='vertical')
|
|
||||||
|
|
||||||
axs[0].plot(df_3['soft_val_acc'], ':', label='CNN_1D Natural')
|
|
||||||
axs[0].plot(df_3['hard_val_acc'], '--', label='CNN_1D Strong')
|
|
||||||
axs[0].set_title('Validation accuracy (3 session training)')
|
|
||||||
|
|
||||||
axs[1].plot(df_1['soft_val_acc'], ':', label='CNN_1D Natural')
|
|
||||||
axs[1].plot(df_1['hard_val_acc'], '--', label='CNN_1D Strong')
|
|
||||||
axs[1].set_title('Validation accuracy (1 session training)')
|
|
||||||
|
|
||||||
#for ax in axs:
|
|
||||||
# ax.set_xlabel('Epochs')
|
|
||||||
# ax.set_ylabel('Accuracy')
|
|
||||||
|
|
||||||
plt.legend(bbox_to_anchor=(1.75, 0.5), title='Typing behavior evaluated\n', loc='center right')
|
|
||||||
plt.ylim(0.50, 1.00)
|
|
||||||
plt.show()
|
|
||||||
|
|
||||||
|
|
||||||
# ----- MODELS ------
|
# ----- MODELS ------
|
||||||
|
|
||||||
# Creates a keras.model with focus on LSTM layers
|
# Creates a keras.model with focus on LSTM layers
|
||||||
@ -1044,8 +1006,8 @@ if __name__ == "__main__":
|
|||||||
# X.shape = (2806, 1, 208)
|
# X.shape = (2806, 1, 208)
|
||||||
# y.shape = (2806, nr_subjects)
|
# y.shape = (2806, nr_subjects)
|
||||||
# session_lengths.shape = (nr_subjects, nr_sessions)
|
# session_lengths.shape = (nr_subjects, nr_sessions)
|
||||||
#X_soft, y_soft, session_lengths_soft = load_data_from_json(SOFT_DATA_PATH_MFCC, nr_classes=5)
|
X_soft, y_soft, session_lengths_soft = load_data_from_json(SOFT_DATA_PATH_MFCC, nr_classes=5)
|
||||||
#X_hard, y_hard, session_lengths_hard = load_data_from_json(HARD_DATA_PATH_MFCC, nr_classes=5)
|
X_hard, y_hard, session_lengths_hard = load_data_from_json(HARD_DATA_PATH_MFCC, nr_classes=5)
|
||||||
|
|
||||||
# Parameters:
|
# Parameters:
|
||||||
NR_SUBJECTS = 5
|
NR_SUBJECTS = 5
|
||||||
@ -1167,7 +1129,10 @@ if __name__ == "__main__":
|
|||||||
|
|
||||||
#plot_comp_spread_single(X, y, session_lengths, NR_SESSIONS, epochs=30)
|
#plot_comp_spread_single(X, y, session_lengths, NR_SESSIONS, epochs=30)
|
||||||
#plot_comp_accuracy_single(X_soft, y_soft, session_lengths_soft, NR_SESSIONS, epochs=30)
|
#plot_comp_accuracy_single(X_soft, y_soft, session_lengths_soft, NR_SESSIONS, epochs=30)
|
||||||
#plot_comp_val_SoftHard(X_soft, y_soft, X_hard, y_hard, session_lengths_soft, session_lengths_hard, NR_SESSIONS, epochs=30)
|
plot_comp_val_SoftHard(X_soft, y_soft, X_hard, y_hard, session_lengths_soft, session_lengths_hard, NR_SESSIONS, epochs=30)
|
||||||
#plot_comp_SoftHard_3(X_soft, y_soft, X_hard, y_hard, session_lengths_soft, session_lengths_hard, NR_SESSIONS, epochs=30)
|
|
||||||
#plot_N_S_val_comp()
|
#plot_comp_SoftHard_3(X_soft, y_soft, X_hard, y_hard, session_lengths_soft, session_lengths_hard, NR_SESSIONS, epochs=30)
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
Loading…
Reference in New Issue
Block a user