ms762wu/EMG_Biometrics_2021
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feat: func which loads data from each csv file

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onto data_containers and the csv_handlers dict
This commit is contained in:
Skudalen 2021-06-23 14:17:12 +02:00
parent 41b2a9e236
commit d24699b8c1
2 changed files with 35 additions and 7 deletions
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2
Handle_emg_data.py
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@ -29,7 +29,7 @@ class CSV_handler:
filtered_df = tot_data_frame[["timestamp", emg_str]]
return filtered_df
def store_df(self, filename:str, emg_nr:int, which_arm:str, df:DataFrame, data_container:Data_container):
def store_df(self, filename:str, emg_nr:int, which_arm:str, data_container:Data_container):
df = self.get_min_max_timestamp(filename, emg_nr)
# Links the retrieved data with the subjects data_container
subject_nr = data_container.subject_nr

40
Signal_prep.py
View File

@ -5,64 +5,92 @@ from Handle_emg_data import CSV_handler, Data_container
def load_user_emg_data():
# CSV data from subject 1
file1_subject1_left = "/Exp20201205_2myo_hardTypePP/HaluskaMarek_20201207_1810/myoLeftEmg.csv"
file2_subject1_left = "/Exp20201205_2myo_hardTypePP/HaluskaMarek_20201207_1830/myoLeftEmg.csv"
file3_subject1_left = "/Exp20201205_2myo_hardTypePP/HaluskaMarek_20201207_1845/myoLeftEmg.csv"
file4_subject1_left = "/Exp20201205_2myo_hardTypePP/HaluskaMarek_20201207_1855/myoLeftEmg.csv"
subject1_left_files = [file1_subject1_left, file2_subject1_left, file3_subject1_left, file4_subject1_left]
file1_subject1_rigth = "/Exp20201205_2myo_hardTypePP/HaluskaMarek_20201207_1810/myoRightEmg.csv"
file2_subject1_rigth = "/Exp20201205_2myo_hardTypePP/HaluskaMarek_20201207_1830/myoRightEmg.csv"
file3_subject1_rigth = "/Exp20201205_2myo_hardTypePP/HaluskaMarek_20201207_1845/myoRightEmg.csv"
file4_subject1_rigth = "/Exp20201205_2myo_hardTypePP/HaluskaMarek_20201207_1855/myoRightEmg.csv"
subject1_right_files = [file1_subject1_rigth, file2_subject1_rigth, file3_subject1_rigth, file4_subject1_rigth]
# CSV data from subject 2
file1_subject2_left = "/Exp20201205_2myo_hardTypePP/HaluskaMaros_20201205_2010/myoLeftEmg.csv"
file2_subject2_left = "/Exp20201205_2myo_hardTypePP/HaluskaMaros_20201205_2025/myoLeftEmg.csv"
file3_subject2_left = "/Exp20201205_2myo_hardTypePP/HaluskaMaros_20201205_2035/myoLeftEmg.csv"
file4_subject2_left = "/Exp20201205_2myo_hardTypePP/HaluskaMaros_20201205_2045/myoLeftEmg.csv"
subject2_left_files = [file1_subject2_left, file2_subject2_left, file3_subject2_left, file4_subject2_left]
file1_subject2_rigth = "/Exp20201205_2myo_hardTypePP/HaluskaMaros_20201205_2010/myoRightEmg.csv"
file2_subject2_rigth = "/Exp20201205_2myo_hardTypePP/HaluskaMaros_20201205_2025/myoRightEmg.csv"
file3_subject2_rigth = "/Exp20201205_2myo_hardTypePP/HaluskaMaros_20201205_2035/myoRightEmg.csv"
file4_subject2_rigth = "/Exp20201205_2myo_hardTypePP/HaluskaMaros_20201205_2045/myoRightEmg.csv"
subject2_right_files = [file1_subject2_rigth, file2_subject2_rigth, file3_subject2_rigth, file4_subject2_rigth]
# CSV data from subject 3
file1_subject3_left = "/Exp20201205_2myo_hardTypePP/HaluskovaBeata_20201205_1700/myoLeftEmg.csv"
file2_subject3_left = "/Exp20201205_2myo_hardTypePP/HaluskovaBeata_20201205_1715/myoLeftEmg.csv"
file3_subject3_left = "/Exp20201205_2myo_hardTypePP/HaluskovaBeata_20201205_1725/myoLeftEmg.csv"
file4_subject3_left = "/Exp20201205_2myo_hardTypePP/HaluskovaBeata_20201205_1735/myoLeftEmg.csv"
subject3_left_files = [file1_subject3_left, file2_subject3_left, file3_subject3_left, file4_subject3_left]
file1_subject3_rigth = "/Exp20201205_2myo_hardTypePP/HaluskovaBeata_20201205_1700/myoRightEmg.csv"
file2_subject3_rigth = "/Exp20201205_2myo_hardTypePP/HaluskovaBeata_20201205_1715/myoRightEmg.csv"
file3_subject3_rigth = "/Exp20201205_2myo_hardTypePP/HaluskovaBeata_20201205_1725/myoRightEmg.csv"
file4_subject3_rigth = "/Exp20201205_2myo_hardTypePP/HaluskovaBeata_20201205_1735/myoRightEmg.csv"
subject3_right_files = [file1_subject3_rigth, file2_subject3_rigth, file3_subject3_rigth, file4_subject3_rigth]
# CSV data from subject 4
file1_subject4_left = "/Exp20201205_2myo_hardTypePP/KelisekDavid_20201209_1900/myoLeftEmg.csv"
file2_subject4_left = "/Exp20201205_2myo_hardTypePP/KelisekDavid_20201209_1915/myoLeftEmg.csv"
file3_subject4_left = "/Exp20201205_2myo_hardTypePP/KelisekDavid_20201209_1925/myoLeftEmg.csv"
file4_subject4_left = "/Exp20201205_2myo_hardTypePP/KelisekDavid_20201209_1935/myoLeftEmg.csv"
subject4_left_files = [file1_subject4_left, file2_subject4_left, file3_subject4_left, file4_subject4_left]
file1_subject4_rigth = "/Exp20201205_2myo_hardTypePP/KelisekDavid_20201209_1900/myoRightEmg.csv"
file2_subject4_rigth = "/Exp20201205_2myo_hardTypePP/KelisekDavid_20201209_1915/myoRightEmg.csv"
file3_subject4_rigth = "/Exp20201205_2myo_hardTypePP/KelisekDavid_20201209_1925/myoRightEmg.csv"
file4_subject4_rigth = "/Exp20201205_2myo_hardTypePP/KelisekDavid_20201209_1935/myoRightEmg.csv"
subject4_right_files = [file1_subject4_rigth, file2_subject4_rigth, file3_subject4_rigth, file4_subject4_rigth]
# CSV data from subject 5
file1_subject5_left = "/Exp20201205_2myo_hardTypePP/KelisekRichard_20201209_2030/myoLeftEmg.csv"
file2_subject5_left = "/Exp20201205_2myo_hardTypePP/KelisekRichard_20201209_2040/myoLeftEmg.csv"
file3_subject5_left = "/Exp20201205_2myo_hardTypePP/KelisekRichard_20201209_2050/myoLeftEmg.csv"
file4_subject5_left = "/Exp20201205_2myo_hardTypePP/KelisekRichard_20201209_2100/myoLeftEmg.csv"
subject5_left_files = [file1_subject5_left, file2_subject5_left, file3_subject5_left, file4_subject5_left]
file1_subject5_rigth = "/Exp20201205_2myo_hardTypePP/KelisekRichard_20201209_2030/myoRightEmg.csv"
file2_subject5_rigth = "/Exp20201205_2myo_hardTypePP/KelisekRichard_20201209_2040/myoRightEmg.csv"
file3_subject5_rigth = "/Exp20201205_2myo_hardTypePP/KelisekRichard_20201209_2050/myoRightEmg.csv"
file4_subject5_rigth = "/Exp20201205_2myo_hardTypePP/KelisekRichard_20201209_2100/myoRightEmg.csv"
subject5_right_files = [file1_subject5_rigth, file2_subject5_rigth, file3_subject5_rigth, file4_subject5_rigth]
Subject1_data_container = Data_container(1, 'HaluskaMarek')
Subject2_data_container = Data_container(1, 'HaluskaMaros')
Subject3_data_container = Data_container(1, 'HaluskovaBeata')
Subject4_data_container = Data_container(1, 'KelisekDavid')
Subject5_data_container = Data_container(1, 'KelisekRichard')
left_list = [subject1_left_files, subject2_left_files, subject3_left_files, subject4_left_files, subject5_left_files]
right_list = [subject1_right_files, subject2_right_files, subject3_right_files, subject4_right_files, subject5_right_files]
csv_handler = CSV_handler
subject1_data_container = Data_container(1, 'HaluskaMarek')
subject2_data_container = Data_container(1, 'HaluskaMaros')
subject3_data_container = Data_container(1, 'HaluskovaBeata')
subject4_data_container = Data_container(1, 'KelisekDavid')
subject5_data_container = Data_container(1, 'KelisekRichard')
subject_data_container_list = [subject1_data_container, subject2_data_container, subject3_data_container,
subject4_data_container, subject5_data_container]
return data_container_dict
for subject_nr in range(5):
# left variant proccessed here
for round in range(4):
for emg_nr in range(8):
csv_handler.store_df(left_list[subject_nr][round], emg_nr, 'left', subject_data_container_list[subject_nr])
# right variant proccessed here
for round in range(4):
for emg_nr in range(8):
csv_handler.store_df(left_list[subject_nr][round], emg_nr, 'right', subject_data_container_list[subject_nr])
return csv_handler.data_container_dict